BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D07SP1|AL429734
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1647 1684 0.0
>3x_Contig1647
Length = 14353
Score = 1684 bits (848), Expect = 0.0
Identities = 850/852 (99%)
Strand = Plus / Minus
Query: 1 atcaatgggaagaataagtacatgtaatagttgaaaggagctttttgatagtagagcacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 atcaatgggaagaataagtacatgtaatagttgaaaggagctttttgatagtagagcacg 1866
Query: 61 taattgagaatgattgtaagggaaccaaaaatgaaatagttcagaagtgacttatgagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 taattgagaatgattgtaagggaaccaaaaatgaaatagttcagaagtgacttatgagaa 1806
Query: 121 ttataatctctgtttagaatgaataatctcaagaaaatggagaatgaataaacaatccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 ttataatctctgtttagaatgaataatctcaagaaaatggagaatgaataaacaatccaa 1746
Query: 181 ccaaggaaacctagtgttacaatggttctgataaatctccaattgtatgttgtcaagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1745 ccaaggaaacctagtgttacaatggttctgataaatctccaattgtatgttgtcaagtat 1686
Query: 241 gcyaatccatctagggtcaccttcattaactcctctgtaagtttaatagcatcgggttct 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1685 gctaatccatctagggtcaccttcattaactcctctgtaagtttaatagcatcgggttct 1626
Query: 301 aattcgttttcacctttcgcaattctctcgattaagctttcaatctgctgtaaatattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 aattcgttttcacctttcgcaattctctcgattaagctttcaatctgctgtaaatattct 1566
Query: 361 tggtaaggtatttcaacgaaagcttcatactccttgtatacaaattgggatgcaatgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 tggtaaggtatttcaacgaaagcttcatactccttgtatacaaattgggatgcaatgatt 1506
Query: 421 tcttgttccttcactagatactgttccaatatggcctttgcattgttgaacaaggcgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 tcttgttccttcactagatactgttccaatatggcctttgcattgttgaacaaggcgttc 1446
Query: 481 aattttttgtcttcaggagcatcaatgaaattcaacggtaactctcctacggagttaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 aattttttgtcttcaggagcatcaatgaaattcaacggtaactctcctacggagttaact 1386
Query: 541 ggataatttgcaccaattaagtatgacattaaggatgcaatatctgcttggttaacatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 ggataatttgcaccaattaagtatgacattaaggatgcaatatctgcttggttaacatca 1326
Query: 601 tttctctttatgtcagcmagattccaattttcagtataattatcaaaaattggagcttga 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 tttctctttatgtcagcaagattccaattttcagtataattatcaaaaattggagcttga 1266
Query: 661 tttttgactggtttgtttataccggcaccccatgcgactaagggtgtacgggtattattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 tttttgactggtttgtttataccggcaccccatgcgactaagggtgtacgggtattattt 1206
Query: 721 ggatgaccatcaccatgagaaccaaaagcactcattccgtgatcggccgtgaagatgaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 ggatgaccatcaccatgagaaccaaaagcactcattccgtgatcggccgtgaagatgaag 1146
Query: 781 gcggtgtcttcatcatcgaaaaattcatgaaccttttccaccagtaatttcacctcctta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 gcggtgtcttcatcatcgaaaaattcatgaaccttttccaccagtaatttcacctcctta 1086
Query: 841 tcaatatatttc 852
||||||||||||
Sbjct: 1085 tcaatatatttc 1074
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7627
Number of Sequences: 1807
Number of extensions: 7627
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)